Doctor Glenn Stone

Journal Articles

• Birzniece, V., Lam, T., McLean, M., Reddy, N., Shahidipour, H., Hayden, A., Gurney, H., Stone, G., Hjortebjerg, R. and Frystyk, J. (2022), 'Insulin-like growth factor role in determining the anti-cancer effect of metformin : RCT in prostate cancer patients', Endocrine Connections, vol 11, no 4 .
• Fahey, P., Page, A., Astell-Burt, T. and Stone, G. (2021), 'Imputing pre-diagnosis health behaviour in cancer registry data and investigating its relationship with oesophageal cancer survival time', PLoS ONE, vol 16, no 44907 .
• Fahey, P., Page, A., Stone, G. and Astell-Burt, T. (2020), 'Augmenting cancer registry data with health survey data with no cases in common : the relationship between pre-diagnosis health behaviour and post-diagnosis survival in oesophageal cancer', BMC Cancer, vol 20, no 1 .
• Fahey, P., Page, A., Stone, G. and Astell-Burt, T. (2020), 'Using estimated probability of pre-diagnosis behavior as a predictor of cancer survival time : an example in esophageal cancer', BMC Medical Research Methodology, vol 20, no 1 .
• Lam, T., Cheema, B., Hayden, A., Lord, S., Gurney, H., Gounden, S., Reddy, N., Shahidipour, H., Read, S., Stone, G., McLean, M. and Birzniece, V. (2020), 'Androgen deprivation in prostate cancer : benefits of home-based resistance training', Sports Medicine - Open, vol 6 .
• Lam, T., McLean, M., Hayden, A., Poljak, A., Cheema, B., Gurney, H., Stone, G., Bahl, N., Reddy, N., Shahidipour, H. and Birzniece, V. (2019), 'A potent liver mediated mechanism for loss of muscle mass during androgen deprivation therapy', Endocrine Connections, vol 8, no 5 , pp 605 - 615.
• Bahl, N., Stone, G., McLean, M., Ho, K. and Birzniece, V. (2018), 'Decorin, a growth hormone-regulated protein in humans', European Journal of Endocrinology, vol 178, no 2 , pp 145 - 152.
• Berman, M., Hao, Z., Stone, G. and Guo, Y. (2018), 'An investigation into the impact of band error variance estimation on intrinsic dimension estimation in hyperspectral images', IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing, vol 11, no 9 , pp 3279 - 3296.
• Lam, T., Cheema, B., Hayden, A., Gurney, H., Gounden, S., Reddy, N., Stone, G., McLean, M. and Birzniece, V. (2018), 'ADT in prostate cancer patients : prevention of adverse effects using a 6-month home-based progressive resistance training program', Clinical Endocrinology, vol 89, no S1 , pp 15 - 15.
• Uribe Guajardo, M., Younan, S., Smith, M., Eagar, S. and Stone, G. (2016), 'Psychological distress is influenced by length of stay in resettled Iraqi refugees in Australia', International Journal of Mental Health Systems, vol 10, no 4 .
• Briggs, C., Morris, C. and Stone, G. (2016), 'Micropylar seed coat restraint and embryonic response to heat shock and smoke control seed dormancy in Grevillea juniperina', Seed Science Research, vol 26, no 2 , pp 111 - 123.
• Hao, Z., Berman, M., Guo, Y., Stone, G. and Johnstone, I. (2016), 'Semi-realistic simulations of natural hyperspectral scenes', IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing, vol 9, no 9 , pp 4407 - 4419.
• Hewitt, A., Holford, P., Renshaw, A., Stone, G. and Morris, C. (2015), 'Seed size and the regeneration niches of one rare (Melaleuca deanei) and three common (Melaleuca styphelioides, Melaleuca thymifolia and Melaleuca nodosa) Melaleuca (Myrtaceae) species of the Sydney region', Austral Ecology, vol 40, no 6 , pp 661 - 671.
• Fahey, P., Mallitt, K., Astell-Burt, T., Stone, G. and Whiteman, D. (2015), 'Impact of pre-diagnosis behavior on risk of death from esophageal cancer : a systematic review and meta-analysis', Cancer Causes and Control, vol 26, no 10 , pp 1365 - 1373.
• Bragg, L., Stone, G., Butler, M., Hugenholtz, P. and Tyson, G. (2013), 'Shining a light on dark sequencing : characterising errors in Ion Torrent PGM data', PLoS Computational Biology, vol 9, no 4 , pp 1 - 18.
• Turhanlar, D., He, Y. and Stone, G. (2013), 'The use of lifts for emergency evacuation - a reliability study', Procedia Engineering, vol 62 , pp 680 - 689.
• Stone, G., Clifford, D., Gustafsson, J., McColl, S. and Hoffmann, P. (2012), 'Visualisation in imaging mass spectrometry using the minimum noise fraction transform', BMC Research Notes, vol 5, no 419 .
• Clifford, D. and Stone, G. (2012), 'Variable penalty dynamic time warping code for aligning mass spectrometry chromatograms in R', Journal of Statistical Software, vol 47 .
• Bragg, L., Stone, G., Imelfort, M., Hugneholtz, P. and Tyson, G. (2012), 'Fast, accurate error-correction of amplicon pyrosequences using Acacia', Nature Methods, vol 9, no 5 , pp 425 - 426.
• Humburg, P., Helliwell, C., Bulgar, D. and Stone, G. (2011), 'Chipseqr: Analysis of chip-seq experiments', BMC Bioinformatics, vol 12 .
• Sutherland, A., Thomas, M., Brandon, R., Brandon, R., Lipman, J., Tang, B., McLean, A., Pascoe, R., Price, G., Nguyen, T., Stone, G. and Venter, D. (2011), 'Development and validation of a novel molecular biomarker diagnostic test for the early detection of sepsis', Critical Care, vol 15, no 3 .
• Olivier, S., Bull, M., Stone, G., Diepenbeek, R., Kormelink, F., Jacops, L. and Chapman, B. (2011), 'Strong and consistently synergistic inactivation of spores of spoilage-associated Bacillus and Geobacillus spp. by high pressure and heat compared with inactivation by heat alone', Applied and Environmental Microbiology, vol 77, no 7 , pp 2317 - 2324.
• Reja, V., Kwok, A., Stone, G., Yang, L., Bassam, B., Missel, A. and Menzel, C. (2010), 'ScreenClust : advanced statistical software for supervised and unsupervised high resolution melting (HRM) analysis', Methods, vol 50, no 4 , pp 10 - 14.
• Clifford, D., Stone, G., Montoliu, I., Rezzi, S., Martin, F., Guy, P., Bruce, S. and Kochhar, S. (2009), 'Alignment using variable penalty dynamic time warping', Analytical Chemistry, vol 81, no 3 , pp 1000 - 1007.
• Bragg, L. and Stone, G. (2009), 'k-link est clustering : evaluating error introduced by chimeric sequences under degrees of linkage', Bioinformatics, vol 25, no 18 , pp 2302 - 2308.
• Stone, G., Chapman, B. and Lovell, D. (2009), 'Development of a log-quadratic model to describe microbial inactivation, illustrated by thermal inactivation of clostridium botulinum', Applied and Environmental Microbiology, vol 75, no 22 , pp 6998 - 7005.
• Mitchell, C., Nelson, A., Cowley, M., Kaplan, W., Stone, G., Sutton, S., Lau, A., Lee, C. and Ho, K. (2009), 'Detection of growth hormone doping by gene expression profiling of peripheral blood', Journal of Clinical Endocrinology and Metabolism, vol 94, no 12 , pp 4703 - 4709.
• Humburg, P., Bulgar, D. and Stone, G. (2008), 'Parameter estimation for robust hmm analysis of chip-chip data', BMC Bioinformatics, vol 9 .
• Nelson, A., Meinhardt, U., Hansen, J., Walker, I., Stone, G., Howe, C., Leung, K., Seibel, M., Baxter, R., Handelsman, D., Kazlauskas, R. and Ho, K. (2008), 'Pharmacodynamics of growth hormone abuse biomarkers and the influence of gender and testosterone : a randomized double-blind placebo-controlled study in young recreational athletes', Journal of Clinical Endocrinology and Metabolism, vol 93, no 6 , pp 2213 - 2222.
• Payne, C., Maleki, S., Messina, M., O'Sullivan, M., Stone, G., Hall, N., Parkinson, J., Wheeler, H., Cook, R., Biggs, M., Little, N., Teo, C., Robinson, B. and McDonald, K. (2008), 'Loss of prostaglandin d-2 synthase : a key molecular event in the transition of a low-grade astrocytoma to an anaplastic astrocytoma', Molecular Cancer Therapeutics, vol 7, no 10 , pp 3420 - 3428.
• Wynne, J., O'Sullivan, M., Cook, M., Stone, G., Nowak, B., Lovell, D. and Elliott, N. (2008), 'Transcriptome analyses of amoebic gill disease-affected atlantic salmon (salmo salar) tissues reveal localized host gene suppression', Marine Biotechnology, vol 10, no 4 , pp 388 - 403.
• Wynne, J., O'Sullivan, M., Stone, G., Cook, M., Nowak, B., Lovell, D., Taylor, R. and Elliott, N. (2008), 'Resistance to amoebic gill disease (agd) is characterised by the transcriptional dysregulation of immune and cell cycle pathways', Developmental and Comparative Immunology, vol 32, no 12 , pp 1539 - 1560.
• Kassahn, K., Caley, M., Ward, A., Connolly, A., Stone, G. and Crozier, R. (2007), 'Heterologous microarray experiments used to identify the early gene response to heat stress in a coral reef fish', Molecular Ecology, vol 16, no 8 , pp 1749 - 1763.
• Kassahn, K., Crozier, R., Ward, A., Stone, G. and Caley, M. (2007), 'From transcriptome to biological function: environmental stress in an ectothermic vertebrate, the coral reef fish pomacentrus moluccensis', BMC Genomics, vol 8, no 358 .
• Mcdonald, K., O'Sullivan, M., Parkinson, J., Shaw, J., Payne, C., Brewer, J., Young, L., Reader, D., Wheeler, H., Cook, R., Biggs, M., Little, N., Teo, C., Stone, G. and Robinson, B. (2007), 'Iqgap1 and igfbp2: Valuable biomarkers for determining prognosis in glioma patients', Journal of Neuropathology and Experimental, vol 66, no 5 , pp 405 - 417.