Publications
Soon Lee 2017
Quek H, Luff J, Cheung K, Kozlov S, Gatei M, Lee CS , Bellingham MC, Noakes PG, Lim YC, Barnett NL, Dingwall S, Wolvetang E, Mashimo T, Roberts TL, Lavin MF. A rat model of ataxia-telangiectasia: evidence for a neurodegenerative phenotype. (opens in a new window) Hum Mol Genet. 2017 Jan 1;26(1):109-123. doi: 10.1093/hmg/ddw371. [Epub ahead of print] Quek H, Luff J, Cheung K, Kozlov S, Gatei M, Lee CS , Bellingham MC, Noakes PG, Lim YC, Barnett NL, Dingwall S, Wolvetang E, Mashimo T, Roberts TL, Lavin MF. Rats with a missense mutation in Atm display neuroinflammation and neurodegeneration subsequent to accumulation of cytosolic DNA following unrepaired DNA damage. (opens in a new window) J Leukoc Biol. 2017 Apr;101(4):927-947. pii: jlb.4VMA0716-316R. [Epub ahead of print] Lai K, Killingsworth M, Matthews S, Caixeiro N, Evangelista C, Wu X, Wykes J, Samakeh A, Forstner D, Niles N, Hong A, Lee CS . Differences in survival outcome between oropharyngeal and oral cavity squamous cell carcinoma in relation to HPV status . (opens in a new window) J Oral Pathol Med. 2017 Sep; 46(8): 574-582. doi: 10.1111/jop.12535. [Epub ahead of print] Lai K, Killingsworth M, Yong J, Matthews S, Ebrahimi A, McGuinness J, Ngo Q, Caixeiro N, Hong A, Lee CS . Specific localization of LC3B in autophagosome: A correlative labelling study with nanoparticle in oral squamous cell carcinoma . (opens in a new window) Exp Mol Pathol. 2017 Jun;102(3):422-427. Pang JB, Savas P, Fellowes AP, Mir Arnau G, Kader T, Vedururu R, Hewitt C, Takano EA, Byrne DJ, Choong DY, Millar EK, Lee CS , O'Toole SA, Lakhani SR, Cummings MC, Mann GB, Campbell IG, Dobrovic A, Loi S, Gorringe KL, Fox SB. Breast ductal carcinoma in situ carry mutational driver events representative of invasive breast cancer . (opens in a new window) Mod Pathol. 2017 Jul;30(7):952-963 Rajendra S, Yang T, Xuan W, Sharma P, Pavey D, Lee CS , Le S, Collins J, Wang B. Active human papillomavirus involvement in Barrett's dysplasia and oesophageal adenocarcinoma is characterized by wild-type p53 and aberrations of the retinoblastoma protein pathway .(opens in a new window) Int J Cancer. 2017 Nov 15;141(10):2037-2049. Pang JB, Molania R, Chand A, Knower K, Takano EA, Byrne DJ, Mikeska T, Millar EKA, Lee CS , O'Toole SA, Clyne C, Gorringe KL, Dobrovic A, Fox SB. LRH-1 expression patterns in breast cancer tissues are associated with tumour aggressiveness . (opens in a new window) 2017 Jul 28;8(48):83626-83636. doi: 10.18632/oncotarget.18886. eCollection 2017 Oct 13. Duivenvoorden HM, Rautela J, Edgington-Mitchell LE, Spurling A, Greening DW, Nowell CJ, Molloy TJ, Robbins E, Brockwell NK, Lee CS , Chen M, Holliday A, Selinger CI, Hu M, Britt KL, Stroud DA, Bogyo M, Möller A, Polyak K, Sloane BF, O'Toole SA, Parker BS. Myoepithelial cell-specific expression of stefin A as a suppressor of early breast cancer invasion . (opens in a new window) J Pathol. 2017 Dec;243(4):496-509. doi: 10.1002/path.4990. Epub 2017 Oct 31. Ng W, Shin JS, Wang B, Lee CS . Exploration of Mutation and DNA Methylation of Polo-Like Kinase 1 (PLK1) in Colorectal Cancer . (opens in a new window) Open J Pathol 2017; 7 (3): Article ID:77746,13 pages. DOI: 10.4236/ojpathology.2017.73005 2016
Caixeiro NJ, Byun HL, Descallar J, Levesque JV, de Souza P, Lee CS . Health professionals’ opinions on supporting a cancer biobank: identification of barriers to combat biobanking pitfalls (opens in a new window) Eur J Human Genetics. 2016 May;24(5):626-32 Caixeiro NJ, Lai K, Lee CS . Quality assessment and preservation of RNA from biobank tissue specimens: a systematic review . (opens in a new window) J Clin Pathol 2016 Mar;69(3):260-5 Hong A, Zhang X, Jones D, Veillard AS, Zhang M, Martin A, Lyons JG, Lee CS , Rose B. Relationships between p53 mutation, HPV status and outcome in oropharyngeal squamous cell carcinoma . (opens in a new window) Radiother Oncol. 2016 Feb;118(2):342-9. Ng WT, Shin JS, Roberts TL, Wang B, Lee CS . Molecular interactions of polo-like kinase 1 in human cancer . (opens in a new window) J Clin Pathol. 2016 Jul;69(7):557-62. Kalinowski DS, Stefani C, Toyokuni S, Ganz T, Anderson GJ, Subramaniam NV, Trinder D, Olynyk JK, Chua A, Jansson PJ, Sahni S, Lane DJ, Merlot AM, Kovacevic Z, Huang ML, Lee CS , Richardson DR. Redox cycling metals: Pedaling their roles in metabolism and their use in the development of novel therapeutics (opens in a new window)Biochim Biophys Acta. 2016 Apr;1863(4):727-48. doi: 10.1016/j.bbamcr.2016.01.026. Review Zhang X, Gee H, Rose B, Lee CS , Clark J, Elliott M, Gamble JR, Cairns MJ, Harris A, Khoury S, Tran N. Regulation of the tumour suppressor PDCD4 by miR-499 and miR-21 in oropharyngeal cancers . (opens in a new window) BMC Cancer. 2016 Feb 11;16:86. doi: 10.1186/s12885-016-2109-4. Hong A, Zhang X, Jones D, Zhang M, Lee CS , Lyons JG, Veillard AS, Rose B. E6 viral protein ratio correlates with outcomes in human papillomavirus related oropharyngeal cancer . (opens in a new window) Cancer Biol Ther. 2016 Feb;17(2):181-7. Hong A, Lee CS , Jones D, Veillard A, Zhang M, Zhang X, Smee R, Corry J, Porceddu S, Milross C, Elliott M, Clark J, Rose B. Rising prevalence of human papillomavirus related oropharyngeal cancer in Australia over the last two decades . (opens in a new window) Head Neck. 2016 May;38(5):743-50. Pare R, Shin JS, Lee CS . Increased expression of senescence markers p14ARF and p16 INK 4a in breast cancer is associated with increased risk of disease recurrence and poor survival outcome . (opens in a new window)Histopathology. 2016; Sep;69(3):479-91. Hong AM, Vilain RE, Romanes S, Yang J, Smith E, Jones D, Scolyer RA, Lee CS , Zhang M, Rose B. PD-L1 expression in tonsillar cancer is associated with human papillomavirus positivity and improved survival: implications for anti-PD1 clinical trials . (opens in a new window) Oncotarget. 2016 Nov 22;7(47):77010-77020. Chng TW, Lee JY, Lee CS , Li H, Tan MH, Tan PH. Validation of the Singapore nomogram for outcome prediction in breast phyllodes tumours: an Australian cohort . (opens in a new window) J Clin Pathol. 2016 Dec;69(12):1124-1126. doi: 10.1136/jclinpath-2016-203951. Shen K, Xi Z, Xie J, Wang H, Xie C, Lee CS , Fahey P, Dong Q, Xu H. Guttiferone K suppresses hepatocellular carcinoma cell motility and metastasis by restoring aberrantly reduced profilin 1 . (opens in a new window)Oncotarget. 2016 Aug 30;7(35):56650-56663. Ho V, Chung L, Revoltar M, Lim SH, Tut TG, Abubakar A, Henderson CJ, Chua W, Ng W, Lee M, De Souza P, Morgan M, Lee CS , Shin JS. MRE11 and ATM Expression Levels Predict Rectal Cancer Survival and Their Association with Radiotherapy Response . (opens in a new window)PLoS One. 2016 Dec 8;11(12):e0167675. doi: 10.1371/journal.pone.0167675. eCollection 2016. PMID: 27930716 2015
Rajendra S, Wang B, Pavey D, Robertson IK,Sharma P, Yang T, Lee CS , Gupta N, Ball MJ, Gill RS,Wu XJ. Persistence of human papillomavirus infection, overexpression of p53, and outcomes of patients after endoscopic ablation of Barrett's esophagus . (opens in a new window) Clinical Gastroenterology and Hepatology 2015; 13:1364-1368. Tut TG, Lim SHS, Dissanayake IU, Descallar J, Chua W, Ng W, de Souza P, Lee CS . Upregulated Polo-Like Kinase 1 Expression Correlates with Inferior Survival Outcomes in Rectal Cancer . (opens in a new window) P LoS ONE 2015; 10(6): e0129313. doi:10.1371/journal. pone.0129313. Zhang M, Rose B, Lee CS , Hong AM. In vitro 3-dimensional tumor model for radiosensitivity of HPV positive OSCC cell lines. (opens in a new window) Cancer Biol Ther 2015; 16 (8), 1231-1240. Lim SH, Chua W, Henderson C, Ng W, Shin JS, Chantrill L, Asghari R, Lee CS , Spring KJ, de Souza P. Predictive and prognostic biomarkers for neoadjuvant chemoradiotherapy in locally advanced rectal cancer . (opens in a new window) Crit Rev Oncol Hematol. 2015 May 15. pii: S1040-8428(15)00092-X. doi: 10.1016/j.critrevonc.2015.05.003. [Epub ahead of print] Review. Lai K, Killingsworth MC, Lee CS . Gene of the month: PIK3CA . (opens in a new window) J Clin Pathol. 2015 Apr;68(4):253-7. doi: 10.1136/jclinpath-2015-202885. Epub 2015 Feb 16. Review. Hong A, Lee CS , Jones D, Veillard A, Zhang M, Zhang X, Smee R, Corry J, Porceddu S, Milross C, Elliott M, Clark J, Rose B. Rising prevalence of human papillomavirus related oropharyngeal cancer in Australia over the last two decades . (opens in a new window) Head Neck. 2014 Dec 18. doi: 10.1002/hed.23942. [Epub ahead of print] Liu J, Zhang M, Rose B, Veillard A-S, Jones D, Lee CS, Hong A. Ki67 expression has prognostic significance in relation to human papillomavirus status in oropharyngeal squamous cell carcinoma . (opens in a new window) Annals of Surgical Oncology 2015; 22 (6):1893-1900. Caixeiro NJ, Byun HL, Descallar J, Levesque JV, de Souza P, Lee CS. Health professionals' opinions on supporting a cancer biobank: identification of barriers to combat biobanking pitfalls . (opens in a new window) Eur J Human Genetics. (in press). Caixeiro NJ, Lai K, Lee CS. Quality assessment and preservation of RNA from biobank tissue specimens: a systematic review . (opens in a new window) J Clin Pathol (in press). Christopher Henderson 2017
Pham T, Liney G, Wong K, Rai R, Lee M, Moses D, Henderson C, Lin M, Shin J, Barton M, 2017, Study protocol: multi-parametric magnetic resonance imaging for therapeutic response prediction in rectal cancer , BMC Cancer , vol 17, no 1 2016
Frew, J. W., Henderson, C. J., & McCrossin, I. D. (2016). The early bird and the worm: a case of cercarial dermatitis.. Med J Aust, 204(3), 122-123. Retrieved fromhttp://www.ncbi.nlm.nih.gov/pubmed/26866553 Revoltar M, Shin J, Lim S, Tut T, Dissanayake I, Descallar J, Ho V, Chua W, Ng W, Lee M, Henderson C, De Souza P, Morgan M, Lee C, 2016, Early marker of DNA damage response, ATM, as a predictor of clinical outcome following radiotherapy in rectal cancer patients , Pathology , vol 48, no Supplement 1, pp S153-S153, [REDI ID: 245108 **]I ID: 250174] Ho V, Chung L, Revoltar M, Lim S, Tut T, Abubakar A, Henderson C, Chua W, Ng W, Lee M, De Souza P, Morgan M, Lee C, Shin J, 2016, MRE11 and ATM expression levels predict rectal cancer survival and their association with radiotherapy response , PLoS One , vol 11, no 12, [REDI ID: 244884] 2015
Toh, J. W. T., Lim, C., Guevara, R., Lea, V., Henderson, C., & Mackenzie, S. (2015). Giant necrotic lymph node metastases from testicular tumour with streptococcus pyogenes sepsis. ANZ Journal of Surgery. doi:10.1111/ans.13191 Lim, S. H., Chua, W., Henderson, C., Ng, W., Shin, J. S., Chantrill, L., . . . de Souza, P. (2015)Predictive and prognostic biomarkers for neoadjuvant chemoradiotherapy in locally advanced rectal cancer . (opens in a new window) Critical Reviews in Oncology/Hematology, 96(1), 67-80. doi: 10.1016/j.critrevonc.2015.05.003 Toh, J. W., Henderson, C., Yabe, T. E., Ong, E., Chapuis, P., & Bokey, L. (2015).Management of sub-5 mm rectal carcinoids with lymph node metastases . (opens in a new window) Gastroenterol Rep (Oxf), 3(4), 350-354. doi:10.1093/gastro/gou073 Li, J. J., & Henderson, C. (2015). Cutaneous crystal storing histiocytosis: A report of two cases. Journal of Cutaneous Pathology, 42(2), 136-143. doi:10.1111/cup.12413 Li, J. J., Forstner, D., & Henderson, C. (2015). Cutaneous Pleomorphic Rhabdomyosarcoma Occurring on Sun-Damaged Skin: A Case Report. American Journal of Dermatopathology, 37(8), 653-657. doi:10.1097/DAD.0000000000000191 Maija Kohonen-Corish 2016
2015
Mladenova DN, Dahlstrom JE, Tran PN, Benthani F, Bean EG, Ng I, Pangon L, Currey N, Kohonen-Corish MRJ . HIF1α deficiency reduces colon inflammation in a mouse model of proximal colon cancer . (opens in a new window) Disease Models & Mechanisms 2015;8:1093-1103 (IF=5.0) Cooper WA, Tran T, Vilain RE, Madore J, Selinger CI, Kohonen-Corish M , Yip PY, Yu B, O'Toole SA, McCaughan BC, Yearley JH, Horvath LG, Kao S, Boyer M, Scolyer RA. PD-L1 expression is a favourable prognostic factor in early stage non-small cell carcinoma . (opens in a new window) Lung Cancer 2015; 89:181-188. (IF=4.0) Kaur S, Lotsari JE, Al-Sohaily S, Warusavitarne J, Kohonen-Corish MRJ , Peltomäki P. Identification of subgroup-specific miRNA patterns by epigenetic profiling of sporadic and Lynch syndrome-associated colorectal and endometrial carcinoma . (opens in a new window) Clinical Epigenetics 2015; 7:20 (IF=4.5) Ewan Millar 2015
ELF5 Drives Lung Metastasis in Luminal Breast Cancer through Recruitment of Gr1+ CD11b+ Myeloid-Derived Suppressor Cells . (opens in a new window) Gallego-Ortega D, Ledger A, Roden DL, Law AM, Magenau A, Kikhtyak Z, Cho C, Allerdice SL, Lee HJ, Valdes-Mora F, Herrmann D, Salomon R, Young AI, Lee BY, Sergio CM, Kaplan W, Piggin C, Conway JR, Rabinovich B, Millar EK , Oakes SR, Chtanova T, Swarbrick A, Naylor MJ, O'Toole S, Green AR, Timpson P, Gee JM, Ellis IO, Clark SJ, Ormandy CJ. PLoS Biol. 2015 Dec 30;13(12):e1002330. doi: 0.1371/journal.pbio.1002330. eCollection 2015 Dec.MicroRNA-Related DNA Repair/Cell-Cycle Genes Independently Associated With Relapse After Radiation Therapy for Early Breast Cancer . (opens in a new window) Gee HE, Buffa FM, Harris AL, Toohey JM, Carroll SL, Cooper CL, Beith J, McNeil C, Carmalt H, Mak C, Warrier S, Holliday A, Selinger C, Beckers R, Kennedy C, Graham P, Swarbrick A, Millar EK , O'Toole SA, Molloy T. Int J Radiat Oncol Biol Phys. 2015 Dec 1;93(5):1104-14. doi: 10.1016/j.ijrobp.2015.08.046. Epub 2015 Sep 3.Proteomic Analysis of Urine to Identify Breast Cancer Biomarker Candidates Using a Label-Free LC-MS/MS Approach . (opens in a new window) Beretov J, Wasinger VC, Millar EK , Schwartz P, Graham PH, Li Y. PLoS One. 2015 Nov 6;10(11):e0141876. doi: 10.1371/journal.pone.0141876. eCollection 2015.Assessment of DNA methylation profiling and copy number variation as indications of clonal relationship in ipsilateral and contralateral breast cancers to distinguish recurrent breast cancer from a second primary tumour . (opens in a new window) Huang KT, Mikeska T, Li J, Takano EA, Millar EK , Graham PH, Boyle SE, Campbell IG, Speed TP, Dobrovic A, Fox SB. BMC Cancer. 2015 Oct 9;15:669. doi: 10.1186/s12885-015-1676-0.DNA methylation of oestrogen-regulated enhancers defines endocrine sensitivity in breast cancer . (opens in a new window) Stone A, Zotenko E, Locke WJ, Korbie D, Millar EK , Pidsley R, Stirzaker C, Graham P, Trau M, Musgrove EA, Nicholson RI, Gee JM, Clark SJ. Nat Commun. 2015 Jul 14;6:7758. doi: 10.1038/ncomms8758.ID4 controls mammary stem cells and marks breast cancers with a stem cell-like phenotype . (opens in a new window) Junankar S, Baker LA, Roden DL, Nair R, Elsworth B, Gallego-Ortega D, Lacaze P, Cazet A, Nikolic I, Teo WS, Yang J, McFarland A, Harvey K, Naylor MJ, Lakhani SR, Simpson PT, Raghavendra A, Saunus J, Madore J, Kaplan W, Ormandy C, Millar EK , O'Toole S, Yun K, Swarbrick A.Nat Commun. 2015 Mar 27;6:6548. doi: 10.1038/ncomms7548Wendy Cooper 2015
Anderson S, Sasson SC, Lee FJ, Larsen S, Cooper W , Garsia R. Episodic fevers and vasodilatory shock mimicking urosepsis in a patient with HIV-associated Multicentric Castleman's Disease: a case report. (opens in a new window) BMC Infect Dis. 2015; 16: 53. Lyle M, Haydu LE, Menzies, AM, Thompson JF, Saw RPM, Spillane AJ, Kefford RJ, Mann GJ, Cooper WA , Yu B, Scolyer RA, O'Toole SA, Long GV. The molecular profile of metastatic melanoma in Australia . (opens in a new window) Pathology. 2016. 48:188-193. Li BT, Lee A, O'Toole S, Cooper W , Yu B, Chaft JE, Arcila ME, Kris MG, Pavlakis N. HER2 insertion YVMA mutant lung cancer: long natural history and response to afatinib . (opens in a new window) Lung Cancer 2015; 90: 617-9. Kao, SC, Kirschner MB, Cooper WA , Tran T, Burgers S, Wright C, Korse, T, van den Broek D, Edelman J, Vallelly M, McCaughan B, Pavlakis N, Clarke S, Molloy M, van Zandwijk N, Reid G. A proteomics-based approach identifies Secreted Protein Acidic and Rich in Cysteine (SPARC) in malignant pleural mesothelioma . (opens in a new window) Br J Cancer 2016; 114:524-31. Tran, T.N., Selinger, C.I., Kohonen-Corish, M.R.J., McCaughan, B., Kennedy, C., O'Toole, S.A., Cooper, W.A . Alterations of MET gene copy number and protein expression in primary non-small cell lung cancer and nodal metastases . (opens in a new window) Clinical Lung Cancer. 2016; 17:30-38. Kao, S.C., Fulham, M., Wong, K., Cooper, W ., Sagong, J.O. Boyer, M. Pattison, S., Brahmbhatt, H., MacDiarmid, J., Reid, G., van Zandwijk, N. A significant metabolic and radiological response following a novel targeted microRNA-based treatment approach in malignant pleural mesothelioma . (opens in a new window) American Journal of Respiratory and Critical Care Medicine. 2015; 191:1467-1469. Williams M, Kirschner MB, Cheng YY, Hanh J, Weiss J, Mugridge N, Wright CM, Linton A, Kao SC, Edelman JB, Vallely MP, McCaughan BC, Cooper W , Klebe S, Lin RCY, Brahmbhatt H, MacDiarmid J, van Zandwijk N, Reid G. miR-193a-3p is a potential tumor suppressor in malignant pleural mesothelioma . Oncotarget. 2015; 6:23480-95. Selinger, C., Cooper, W ., Lum, T., McNeil, C., Morey, A., Waring, P., Amanuel, B., Millward, M., Peverall, J., Van Vliet, C., Christie, M., Tran, Y., Diakos, C., Pavlakis, N., Gill, A.J., O'Toole, S.A. Equivocal ALK FISH cases may benefit from ancillary ALK FISH probe testing . (opens in a new window) Histopathology 201;67:654-63. Cooper, W.A ., Tran, T., Madore, J., Selinger, C., Kohonen-Corish, M., Yip, P.Y., O'Toole, S.A., McCaughan, B.C., Horvath, L., Kao, S., Boyer, M., Scolyer, R.A. PD-L1 expression is a favourable prognostic factor in early stage NSCLC . (opens in a new window) Lung Cancer. 2015; 89:181-188.Wang, S., Yu, B., Ng, C.C., Mercorella, B., Selinger, C.I., O'Toole, S.A., Cooper, W.A. The suitability of small biopsy and cytology specimens for EGFR and other mutation testing in non-small cell lung cancer . (opens in a new window) Translational Lung Cancer Research. 2015; 4:119-125. Luk, P.P., Yu, B., Ng, C.C., Mercorella, B., Selinger, C., Lum, T., Kao, S., O'Toole, S.A., Cooper, W.A . BRAF mutations in non-small cell lung cancer . (opens in a new window) Translational Lung Cancer Research. 2015; 4:142-148. Nicole Caixeiro Silvia Ling 2016
2015
Reberio P, James A, Ling S , Lee CS, Ho U, Luff J, Quek H, Lavin M, Roberts T. ATM and SMG1 are tumour suppressors which co-regulate blood cancer development and cellular responses to DNA damage and oxidative stress . (opens in a new window) Leukaemia and Lymphoma 56: 78-78. 01 Sep 2015 Getta B, Ponniah G, Ling S . Intravenous immunoglobulin induces short-term reversal of drug-induced autoimmune neutropenia . (opens in a new window) Tansfusion Medicine 25(5):347-348 01 Jan 2016 Nicholas Nikesitch, Chang Tao, Ken Lai, Murray Killingsworth, Sunna Bae, Silvia C.W. Ling . The unfolded protein response in bortezomib resistant myeloma cells. Pathology Feb 2016. P Rebeiro, A James, S Ling , N Caxeiro, CS Lee, T Roberts. The role of SMG1 expression in B cell lymphoproliferative disease . (opens in a new window) Pathology 48, S74 Murray Killingsworth 2015
Lai K, Killingsworth MC , Lee CS. Gene of the month: PIK3CA . (opens in a new window) Journal of Clinical Pathology 2015 – doi: 10.1136/jclinpath-2015-202885. [Epub ahead of print] Review